Chemistry

Laboratory of Molecular Mechanisms of Disease led by Dr. Darkhan Utepbergenov has published a paper in a prestigious journal Nature Communications (IF=16.6).

The paper demonstrates and characterizes a new enzymatic activity of human protein DJ-1 providing a mechanistic background for its long-known neuroprotective properties.

The study has shed light on the underlying molecular function of the PARK7 gene product, DJ-1, in protecting against familial Parkinsonism. This gene mutation leads to the loss of dopaminergic neurons, a key feature of Parkinson's disease. Although DJ-1's cytoprotective effects have been known, the specific role it plays in this process has remained unclear. The study reveals that DJ-1 prevents the acylation of amino groups of proteins and metabolites by 1,3-bisphosphoglycerate (1,3-BPG) – a glycolytic byproduct. This acylation process is indirect and presumed to occur via the formation of an unstable intermediate, specifically a cyclic 3-phosphoglyceric anhydride (cPGA). To understand the enzymatic activity of DJ-1 in this context, the researchers developed simple and effective procedures for synthesis and quantitation of cPGA. They characterized cPGA as a highly reactive acylating electrophile and demonstrated that DJ-1 is an efficient cPGA hydrolase, with a kcat/Km of 5.9 × 106 M−1 s−1. To further validate the cytoprotective function of DJ-1, the researchers conducted experiments using DJ-1-null cells. The results showed that DJ-1 protects against the accumulation of 3-phosphoglyceroyl-lysine residues in proteins. This finding confirms that DJ-1's catalytic hydrolysis of cPGA plays a crucial role in mitigating the damage caused by this glycolytic byproduct. In summary, this study establishes a definitive cytoprotective function for DJ-1. By destroying cPGA, DJ-1 prevents protein acylation and protects against the accumulation of harmful 3-phosphoglyceroyl-lysine residues. These findings contribute to our understanding of the molecular mechanisms underlying Parkinson's disease and may pave the way for the development of novel therapeutic strategies.
To read more about the paper, please click this link.

To find out more about the Laboratory of Molecular Mechanisms of Disease, click this link.
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